Getting started
Enter your gene names of interest (official gene symbols, e.g. EGFR) into the text field. You can enter up to 20 genes.
Dataset
The heatmap depicts multi-ome data from the MONTE workflow ("hlaft") and the serial multi-omic enrichment workflow ("noip"). CNA and RNAseq are copied from the LUAD 2020 discovery dataset. HLA tracks show whether at least one class 1 or class 2 peptide was detected in the MONTE workflow. For other data types the heatmap depicts abundances observed in tumor relative to normal adjacent tissue (NAT).
Type | # MONTE | # serial emrichment | # samples |
---|---|---|---|
Protein | 101580 | 104630 | 10 |
Phosphosites | 221580 | 263920 | 10 |
Acetylsites | 54350 | 38600 | 10 |
Ubiquitylsites | 93950 | 94790 | 10 |
Getting started
Enter your gene name of interest (official gene symbols, e.g. PIK3CA) to view associated HLA-I and HLA-II sequences. Hover over participant names to view HLA-I types, or click the checkbox "show HLA-I typing" to view as a table.
Download HLA tables to see more information, including HLA typing and HLAthena predictions.